Difference between revisions of "Literature"
From salvaEwiki
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Here I put stuff of relevance in my PhD. | Here I put stuff of relevance in my PhD. | ||
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| + | ==2005== | ||
| + | *Bapteste et al. find with heatmaps no congruency in ortholog gene sets, failing to support tree-thinking. | ||
==2004== | ==2004== | ||
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*Maddison et al. describe the gene trees in the species trees. | *Maddison et al. describe the gene trees in the species trees. | ||
==References== | ==References== | ||
| + | Bapteste, E. et al. Do orthologous gene phylogenies really support tree-thinking? BMC Evolutionary Biology 5, 1-10, doi:10.1186/1471-2148-5-33 (2005). | ||
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Charlebois, R. L. & Doolittle, W. F. Computing prokaryotic gene ubiquity: Rescuing the core from extinction. Genome Research 14, 2469-2477, doi:10.1101/gr.3024704 (2004). | Charlebois, R. L. & Doolittle, W. F. Computing prokaryotic gene ubiquity: Rescuing the core from extinction. Genome Research 14, 2469-2477, doi:10.1101/gr.3024704 (2004). | ||
Revision as of 00:13, 16 December 2019
Here I put stuff of relevance in my PhD.
Contents
2005
- Bapteste et al. find with heatmaps no congruency in ortholog gene sets, failing to support tree-thinking.
2004
- Charlebois and Doolittle "rescue the core from extinction".
2002
- Gogarten et al. kills 16S trees.
"... tree-like phylogenies are inadecuate to represent the pattern of prokaryotic evolution at any level."
1997
- Maddison et al. describe the gene trees in the species trees.
References
Bapteste, E. et al. Do orthologous gene phylogenies really support tree-thinking? BMC Evolutionary Biology 5, 1-10, doi:10.1186/1471-2148-5-33 (2005).
Charlebois, R. L. & Doolittle, W. F. Computing prokaryotic gene ubiquity: Rescuing the core from extinction. Genome Research 14, 2469-2477, doi:10.1101/gr.3024704 (2004).
Gogarten, J. P., Doolittle, W. F. & Lawrence, J. G. Prokaryotic evolution in light of gene transfer. Molecular Biology and Evolution 19, 2226-2238, doi:10.1093/oxfordjournals.molbev.a004046 (2002).
Maddison, W. P. Gene trees in species trees. Systematic Biology 46, 523-536, doi:10.1093/sysbio/46.3.523 (1997).
